It depends. The car might be in the same ballpark as far as lowering with the other setup, but unfortunately, it doesn’t guarantee the same alignment because it can be significantly off.
There’s one simple concept you must be aware of. When lowering the Spyder, it produces negative camber, which is fine, but unfortunately, when camber is changed, the toe also changes because they’re linked. This can have an adverse effect on the alignment and tire wear if the toe is out of specification. Additionally, when you change the struts, there’s a slight give when the bolts are tightened to the knuckle, which can also slightly change the alignment.
I’ve seen it where each side does its own thing as far as being out of specification when looking at the before alignment sheet until it’s properly corrected. The car will also drive a bit weird, especially when turning, and can be dangerous if the toe is grossly out of spec in the rear.
Where did you set your front camber plates? If its right in the middle it's probably wrong. When you get an alignment aim for -1.5 camber for the front using the camber plates and then have them adjust the toe to 0 and it will be lovely.
If you get an alignment now it will be in the ball park once it settles down but it up to you as you might need two alignments if you want to play it safe.